No, the VR Transcoder is specifically designed to create bitstreams that are optimized for VR use cases, not for speaker playback. For example, Spatial Coding in the VR Transcoder is preset to ignore speaker metadata such as size, so this would be ignored in any encoded file created by the VR Transcoder.    

For Home Theater content the following may be use for encoding DD+JOC:  Dolby Media Producer, Dolby Media Generator, and Dolby VM600 Optimizer.